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Table 1 U-Net architecture used for the DCGMM in our study

From: An automatic nuclei segmentation method based on deep convolutional neural networks for histopathology images

Layer

Details

 

Layer

Details

Input

  

Output

 

↓

  

↑

 

↓

  

conv9_3

1x1x32; ReLU

↓

  

conv9_2

3x3x64; ReLU

conv1_1

3x3x32; ReLU

 

conv9_1

3x3x64; ReLU

conv1_2

3x3x32; ReLU

→

concat4

concatenate upsample4 with conv1_2

↓

  

↑

 

pool1

2x2 max pool stride 2

 

↑

 

↓

  

upsample4

2x2 upsample of conv8

conv2_1

3x3x64; ReLU

 

conv8

3x3x32; ReLU

conv2_2

3x3x64;ReLU

→

concat3

concatenate upsample3 with conv2_2

↓

  

↑

 

pool2

2x2 max pool stride 2

 

↑

 

↓

  

upsample3

2x2 upsample of conv7

conv3_1

3x3x128; ReLU

 

conv7

3x3x64; ReLU

conv3_2

1x1x128; ReLU

 

↑

 

conv3_3

1x1x128; ReLU

→

concat2

concatenate upsample2 with conv3_3

↓

  

↑

 

pool3

2x2 max pool stride 2

 

↑

 

conv4_1

3x3x256; ReLU

 

upsample2

2x2 upsample of conv6

conv4_2

3x3x256; ReLU

 

conv6

3x3x128; ReLU

conv4_3

1x1x256;ReLU

→

concat1

concatenate upsample1 with conv4_3

↓

  

↑

 

pool4

2x2 max pool stride 2

 

↑

 

conv5_1

3x3x256; ReLU

 

upsample1

2x2 upsample of conv5_3

conv5_2

3x3x256; ReLU

 

↑

 

conv5_3

1x1x256; ReLU

→

↑

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